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Intron Name: Anas_platyrhynchos_platyrhynchos_1_45845228_45846229_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

45845228 - 45846229

Intron Length:

1002

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTAAA

U12 Branch Point Sequence:

TAAACAGTAAGA

Flanking Amino Acid:

LLAGDRSLSNVIAHEISHSW

Intron Amino Acid Position:

291

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

77.1

31.3

Major BPS

67.6

0.44

1.2

69.9

35.3

Major PPT

78.5

0.64

0.9

76.8

37.4

Minor 5ss

35.4

-1.7

3.2

46.1

42.2

Minor BPS

42.3

-0.5

2.4

55.62

42.6

Associated Gene:

Gene:

LTA4H

Ensembl Gene ID:

ENSAPLG00000002921

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003042

45837837 - 45852679

14843