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Intron Name: Anas_platyrhynchos_platyrhynchos_1_45855377_45855826_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

45855377 - 45855826

Intron Length:

450

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

ATATTTCTTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

TCATGTTTACTT

Flanking Amino Acid:

ALEDNEFVEVVIEGDIMSPD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

75.9

35.2

Major BPS

81.8

0.79

1.1

34.5

Major PPT

78.5

0.64

0.9

70.9

40.2

Minor 5ss

38.8

-1.3

2.9

45.4

43.9

Minor BPS

49.1

0.01

67.65

44.2

Associated Gene:

Gene:

HAL

Ensembl Gene ID:

ENSAPLG00000003775

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003899

45854855 - 45867907

13053