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Intron Name: Anas_platyrhynchos_platyrhynchos_1_45855888_45856063_F

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

45855888 - 45856063

Intron Length:

176

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTATCCTTT

5'SS Class:

strong_minor

3'SS Sequence:

ACGTAACTTTCAG|A

3'SS Class:

minor_BPS

U2 Branch Point Sequence:

TTGACAT

U12 Branch Point Sequence:

TTTTCCTTTACG

Flanking Amino Acid:

FIPSQPEGVHLYSKYREPEQ

Intron Amino Acid Position:

103

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.9

0.02

1.2

57.1

42.4

Major BPS

67.6

0.44

1.2

Major PPT

68.7

0.42

63.2

42.4

Minor 5ss

98.8

1.64

0.5

12.5

Minor BPS

79.2

0.77

1.6

35.8

Associated Gene:

Gene:

HAL

Ensembl Gene ID:

ENSAPLG00000003775

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003899

45854855 - 45867907

13053