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Intron Name: Anas_platyrhynchos_platyrhynchos_1_45856473_45856576_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

45856473 - 45856576

Intron Length:

104

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGATT

5'SS Class:

strong_major

3'SS Sequence:

ACTCATTTTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTCAT

U12 Branch Point Sequence:

ATGTTCAAAATA

Flanking Amino Acid:

SLGKGLYKIKLTPEAEAKVK

Intron Amino Acid Position:

138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

84.9

32.1

Major BPS

87.1

0.92

0.7

85.9

22.5

Major PPT

74.5

0.55

0.9

65.9

Minor 5ss

37.6

-1.4

3.5

56.9

47.4

Minor BPS

48.4

-0.1

1.9

61.82

38.9

Associated Gene:

Gene:

HAL

Ensembl Gene ID:

ENSAPLG00000003775

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003899

45854855 - 45867907

13053