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Intron Name: Anas_platyrhynchos_platyrhynchos_1_45864109_45865539_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

45864109 - 45865539

Intron Length:

1431

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TGGGTTTTTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGTTCAC

U12 Branch Point Sequence:

TTCTGCCCAACG

Flanking Amino Acid:

MIAHCTAAALVSENKALCHP

Intron Amino Acid Position:

507

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

74.9

35.3

Major BPS

62.6

0.31

1.2

66.7

39.9

Major PPT

78.8

0.65

72.9

42.2

Minor 5ss

29.4

-2.4

3.1

33.3

41.7

Minor BPS

46.4

-0.4

2.3

60.29

47.1

Associated Gene:

Gene:

HAL

Ensembl Gene ID:

ENSAPLG00000003775

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003899

45854855 - 45867907

13053