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Intron Name: Anas_platyrhynchos_platyrhynchos_1_45866762_45867757_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

45866762 - 45867757

Intron Length:

996

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TATGATTTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATGAT

U12 Branch Point Sequence:

TTTTACTTTATG

Flanking Amino Acid:

AAHRLLVEQKVWEVAKPYIE

Intron Amino Acid Position:

612

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.1

1.04

0.7

90.4

20.6

Major BPS

84.6

0.86

41.2

Major PPT

75.3

0.57

0.9

68.6

41.5

Minor 5ss

33.2

-1.9

3.4

48.7

47.5

Minor BPS

61.8

0.23

1.9

72.55

40.1

Associated Gene:

Gene:

HAL

Ensembl Gene ID:

ENSAPLG00000003775

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003899

45854855 - 45867907

13053