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Intron Name: Anas_platyrhynchos_platyrhynchos_1_45872524_45872895_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

45872524 - 45872895

Intron Length:

372

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCTAT

5'SS Class:

strong_major

3'SS Sequence:

ATTTTCCTGCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

TTCTGCTTAATT

Flanking Amino Acid:

FNPNAYCFSMPMVMHLACVN

Intron Amino Acid Position:

345

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

76.7

34.9

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

72.7

0.51

67.1

39.8

Minor 5ss

45.7

-0.5

2.9

61.3

44.6

Minor BPS

73.2

0.81

1.7

87.41

38.9

Associated Gene:

Gene:

AMDHD1

Ensembl Gene ID:

ENSAPLG00000003873

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045854

45866677 - 45882138

15462

ENSAPLT00000003985

45871583 - 45882138

10556