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Intron Name: Anas_platyrhynchos_platyrhynchos_1_45872990_45875617_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

45872990 - 45875617

Intron Length:

2628

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCCA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCCACTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTGAC

U12 Branch Point Sequence:

TTTTTCCCACTA

Flanking Amino Acid:

VLLPTTAYMLRLKQPQARKM

Intron Amino Acid Position:

313

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

72.3

Major BPS

73.6

0.59

0.9

63.3

35.6

Major PPT

77.5

0.62

0.8

72.2

33.9

Minor 5ss

-2.2

3.2

39.6

45.9

Minor BPS

47.4

-0.2

2.1

67.7

39.2

Associated Gene:

Gene:

AMDHD1

Ensembl Gene ID:

ENSAPLG00000003873

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045854

45866677 - 45882138

15462

ENSAPLT00000003985

45871583 - 45882138

10556