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Intron Name: Anas_platyrhynchos_platyrhynchos_1_45924796_45936676_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

45924796 - 45936676

Intron Length:

11881

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

CCTTTCTGTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAGAGAT

U12 Branch Point Sequence:

TGGTCCCACACC

Flanking Amino Acid:

SSPFPCTGGEVIYRALSPPL

Intron Amino Acid Position:

203

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.8

77.8

38.7

Major BPS

47.6

-0.1

1.2

42.1

39.2

Major PPT

80.6

0.69

0.9

76.1

32.4

Minor 5ss

32.4

-2

40.4

45.7

Minor BPS

44.7

-0.4

2.3

59.56

45.3

Associated Gene:

Gene:

NTN4

Ensembl Gene ID:

ENSAPLG00000004278

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025743

45923710 - 45957436

33727

ENSAPLT00000004390

45920608 - 45957436

36829