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Intron Name: Anas_platyrhynchos_platyrhynchos_1_46161451_46164554_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46161451 - 46164554

Intron Length:

3104

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTTTTT

5'SS Class:

strong_major

3'SS Sequence:

ATTTTATTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TAACACATAATT

Flanking Amino Acid:

SKGEPDSQDQGKASGKKTKV

Intron Amino Acid Position:

884

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

82.4

30.8

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

83.2

0.75

0.8

78.6

34.2

Minor 5ss

58.1

0.27

2.3

39.6

Minor BPS

50.8

0.1

1.8

70.31

39.7

Associated Gene:

Gene:

FGD6

Ensembl Gene ID:

ENSAPLG00000005867

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006108

46143458 - 46202820

59363

ENSAPLT00000044085

46136529 - 46200580

64052