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Intron Name: Anas_platyrhynchos_platyrhynchos_1_46185215_46185320_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46185215 - 46185320

Intron Length:

106

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

AATTTCTTATCT

Flanking Amino Acid:

NHANDIMKQGDNFQKLMQIQ

Intron Amino Acid Position:

1086

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

84.6

33.2

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

0.83

0.7

81.7

23.1

Minor 5ss

42.9

-0.8

2.9

41.2

Minor BPS

70.3

0.71

1.5

83.35

37.4

Associated Gene:

Gene:

FGD6

Ensembl Gene ID:

ENSAPLG00000005867

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006108

46143458 - 46202820

59363

ENSAPLT00000044085

46136529 - 46200580

64052