Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_46195214_46196580_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46195214 - 46196580

Intron Length:

1367

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGAAA

5'SS Class:

strong_major

3'SS Sequence:

CTATGCATTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

ATATATTCATCC

Flanking Amino Acid:

DHCFRELQKQDNQCTPKSGS

Intron Amino Acid Position:

1305

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

77.3

32.6

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

74.6

0.55

0.9

70.4

39.7

Minor 5ss

30.9

-2.2

3.2

46.4

Minor BPS

46.5

-0.2

1.9

59.11

39.6

Associated Gene:

Gene:

FGD6

Ensembl Gene ID:

ENSAPLG00000005867

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044085

46136529 - 46200580

64052

ENSAPLT00000006108

46143458 - 46202820

59363