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Intron Name: Anas_platyrhynchos_platyrhynchos_1_46225939_46230515_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46225939 - 46230515

Intron Length:

4577

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACATACA

5'SS Class:

major

3'SS Sequence:

CTGTTCTTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTACAT

U12 Branch Point Sequence:

AATCCATTACAT

Flanking Amino Acid:

HQIIEQQMGEITHSQGAVTQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

74.2

36.1

Major BPS

73.9

0.59

30.2

Major PPT

80.5

0.69

0.8

73.4

37.1

Minor 5ss

34.3

-1.8

2.9

43.6

43.5

Minor BPS

48.1

-0

1.9

68.25

41.5

Associated Gene:

Gene:

NR2C1

Ensembl Gene ID:

ENSAPLG00000006253

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006547

46222532 - 46255381

32850

ENSAPLT00000046922

46222532 - 46255381

32850

ENSAPLT00000029426

46222532 - 46255381

32850