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Intron Name: Anas_platyrhynchos_platyrhynchos_1_46230624_46235933_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

46230624 - 46235933

Intron Length:

5310

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGCTTC

5'SS Class:

weak_major

3'SS Sequence:

AATGTATTATTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTACAT

U12 Branch Point Sequence:

ATTACCATAACA

Flanking Amino Acid:

SGLSLPQRIQIVTDQQTGQK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.77

0.9

74.9

36.3

Major BPS

73.9

0.59

30.2

Major PPT

63.1

0.3

60.9

Minor 5ss

65.8

0.53

2.2

40.1

Minor BPS

69.4

0.6

1.6

80.19

34.8

Associated Gene:

Gene:

NR2C1

Ensembl Gene ID:

ENSAPLG00000006253

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046922

46222532 - 46255381

32850

ENSAPLT00000044701

46222532 - 46255381

32850

ENSAPLT00000006547

46222532 - 46255381

32850