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Intron Name: Anas_platyrhynchos_platyrhynchos_1_46236165_46239464_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46236165 - 46239464

Intron Length:

3300

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGATAAT

5'SS Class:

major

3'SS Sequence:

TATTTTCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATGAA

U12 Branch Point Sequence:

TCTTTCCTATTT

Flanking Amino Acid:

SPDISAQHIQILTDNSPNEQ

Intron Amino Acid Position:

132

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.69

80.3

34.3

Major BPS

58.9

0.22

49.8

35.1

Major PPT

89.2

0.88

0.7

81.5

35.8

Minor 5ss

35.4

-1.7

3.2

50.1

46.4

Minor BPS

53.9

0.2

1.9

75.75

41.6

Associated Gene:

Gene:

NR2C1

Ensembl Gene ID:

ENSAPLG00000006253

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044701

46222532 - 46255381

32850

ENSAPLT00000006547

46222532 - 46255381

32850

ENSAPLT00000046922

46222532 - 46255381

32850