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Intron Name: Anas_platyrhynchos_platyrhynchos_1_46241111_46243502_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46241111 - 46243502

Intron Length:

2392

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTAAGTCTG

5'SS Class:

major

3'SS Sequence:

ACTGTTTTATTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

TGTGACATAATA

Flanking Amino Acid:

RCIAFGMKQDSVQCERKPIE

Intron Amino Acid Position:

219

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.1

67.4

43.5

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

71.3

0.48

0.9

70.8

39.2

Minor 5ss

40.4

-1.1

3.1

56.3

42.1

Minor BPS

50.2

1.9

66.21

40.1

Associated Gene:

Gene:

NR2C1

Ensembl Gene ID:

ENSAPLG00000006253

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044701

46222532 - 46255381

32850

ENSAPLT00000029426

46222532 - 46255381

32850

ENSAPLT00000006547

46222532 - 46255381

32850

ENSAPLT00000046922

46222532 - 46255381

32850