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Intron Name: Anas_platyrhynchos_platyrhynchos_1_46245357_46248830_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46245357 - 46248830

Intron Length:

3474

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCAC

5'SS Class:

strong_major

3'SS Sequence:

CTTGATCACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTCTTGATC

Flanking Amino Acid:

QEEQASSDVTRAFDTLAKAL

Intron Amino Acid Position:

360

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

38.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

68.1

0.41

61.5

38.9

Minor 5ss

-2.2

3.3

45.6

Minor BPS

0.93

84.94

26.6

Associated Gene:

Gene:

NR2C1

Ensembl Gene ID:

ENSAPLG00000006253

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006547

46222532 - 46255381

32850