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Intron Name: Anas_platyrhynchos_platyrhynchos_1_46253909_46254576_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46253909 - 46254576

Intron Length:

668

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGTAAT

5'SS Class:

strong_major

3'SS Sequence:

GGGTGTCTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATAAC

U12 Branch Point Sequence:

TTATATAGAACA

Flanking Amino Acid:

YLKAIVLFSPDHPGLENVVQ

Intron Amino Acid Position:

548

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.77

0.9

81.4

31.6

Major BPS

69.1

0.48

32.1

Major PPT

70.9

0.47

65.9

45.3

Minor 5ss

43.6

-0.7

2.6

56.3

42.5

Minor BPS

49.1

-0

1.9

67.55

Associated Gene:

Gene:

NR2C1

Ensembl Gene ID:

ENSAPLG00000006253

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044701

46222532 - 46255381

32850

ENSAPLT00000029426

46222532 - 46255381

32850

ENSAPLT00000006547

46222532 - 46255381

32850

ENSAPLT00000046922

46222532 - 46255381

32850