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Intron Name: Anas_platyrhynchos_platyrhynchos_1_46421090_46424534_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

46421090 - 46424534

Intron Length:

3445

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGCTA

5'SS Class:

strong_major

3'SS Sequence:

ACCCATCGTGAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

69.6

42.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

0.07

1.1

52.2

36.1

Minor 5ss

32.9

-1.9

3.6

46.5

48.8

Minor BPS

70.5

0.72

1.5

86.8

33.5

Associated Gene:

Gene:

CEP83

Ensembl Gene ID:

ENSAPLG00000015313

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015963

46420542 - 46445047

24506