Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_46431970_46435121_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46431970 - 46435121

Intron Length:

3152

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTCTAATTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATTTTTCTAATT

Flanking Amino Acid:

EREVNSLTAKVEELKHSHKL

Intron Amino Acid Position:

304

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

81.6

29.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

75.5

0.57

0.8

73.9

35.4

Minor 5ss

-1.5

3.3

50.9

39.6

Minor BPS

64.8

0.54

1.6

82.33

32.9

Associated Gene:

Gene:

CEP83

Ensembl Gene ID:

ENSAPLG00000015313

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015963

46420542 - 46445047

24506