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Intron Name: Anas_platyrhynchos_platyrhynchos_1_46459446_46460288_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46459446 - 46460288

Intron Length:

843

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACAAAG

5'SS Class:

major

3'SS Sequence:

TCCTGCTGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

GTGTTGCTAATG

Flanking Amino Acid:

VFKKKTNTRPGVDYSDEHCH

Intron Amino Acid Position:

313

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

1.1

71.6

40.1

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

70.6

0.46

0.9

37.1

Minor 5ss

38.4

-1.3

2.9

48.5

47.2

Minor BPS

44.1

-0.5

2.3

51.94

43.1

Associated Gene:

Gene:

PLXNC1

Ensembl Gene ID:

ENSAPLG00000015114

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015790

46452478 - 46479815

27338