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Intron Name: Anas_platyrhynchos_platyrhynchos_1_4673942_4674629_F

Intron Information:

Intron Rank:

135083

Intron Class:

major

Intron Phase:

Intron Coordinates:

4673942 - 4674629

Intron Length:

688

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAAGG

5'SS Class:

strong_major

3'SS Sequence:

TCCCTTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTCGAT

U12 Branch Point Sequence:

CAGTATTCGATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

66.4

45.1

Major BPS

64.9

0.37

1.3

64.2

Major PPT

81.6

0.71

0.8

79.5

32.5

Minor 5ss

31.5

-2.1

3.1

39.9

45.7

Minor BPS

45.1

-0.3

1.7

56.29

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022678

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038160

4673248 - 4675505

2258