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Intron Name: Anas_platyrhynchos_platyrhynchos_1_46754384_46761370_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46754384 - 46761370

Intron Length:

6987

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACAAAC

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

ATGTTAATACTT

Flanking Amino Acid:

GAAVREVYEEAGVKGKLGRL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

1.1

75.1

35.1

Major BPS

84.4

0.85

34.5

Major PPT

94.8

1.01

0.5

92.6

17.3

Minor 5ss

39.3

-1.2

2.9

51.9

44.9

Minor BPS

44.2

-0.3

63.78

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031124

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021086

46752026 - 46787386

35361