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Intron Name: Anas_platyrhynchos_platyrhynchos_1_46917991_46928404_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46917991 - 46928404

Intron Length:

10414

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTGGGTCTT

5'SS Class:

major

3'SS Sequence:

CTTTTTATAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CTTTTTATAATA

Flanking Amino Acid:

QELRDLPAVTGFICPLCMKS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.8

0.28

1.1

62.1

43.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

77.2

0.61

0.9

74.5

33.7

Minor 5ss

36.2

-1.6

3.5

59.1

45.4

Minor BPS

60.5

0.33

1.6

71.1

35.7

Associated Gene:

Gene:

EEA1

Ensembl Gene ID:

ENSAPLG00000014455

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042770

46872188 - 46976010

103823

ENSAPLT00000023696

46917868 - 46976010

58143