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Intron Name: Anas_platyrhynchos_platyrhynchos_1_46932656_46932777_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46932656 - 46932777

Intron Length:

122

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGGAAAG

5'SS Class:

major

3'SS Sequence:

TTTTTCTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAC

U12 Branch Point Sequence:

TTTCCCCCATCT

Flanking Amino Acid:

EVQDLQASLKEERWYSEELK

Intron Amino Acid Position:

103

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.2

0.45

1.2

63.7

42.3

Major BPS

0.5

0.9

61.4

35.9

Major PPT

91.2

0.93

0.6

85.4

29.4

Minor 5ss

27.8

-2.5

2.9

31.1

42.6

Minor BPS

49.5

0.04

2.1

79.09

42.4

Associated Gene:

Gene:

EEA1

Ensembl Gene ID:

ENSAPLG00000014455

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042770

46872188 - 46976010

103823

ENSAPLT00000023696

46917868 - 46976010

58143

ENSAPLT00000015124

46872188 - 46976010

103823