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Intron Name: Anas_platyrhynchos_platyrhynchos_1_46951839_46952805_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46951839 - 46952805

Intron Length:

967

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGACAT

5'SS Class:

strong_major

3'SS Sequence:

CCTTTTTTCCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTCAT

U12 Branch Point Sequence:

TGATCATTCATT

Flanking Amino Acid:

QLKLSRAEEQLKEKAANSTE

Intron Amino Acid Position:

469

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

71.6

40.1

Major BPS

79.8

0.74

0.9

81.3

29.9

Major PPT

86.2

0.81

0.7

79.6

32.4

Minor 5ss

32.2

-2

3.4

46.9

48.4

Minor BPS

53.8

0.2

74.98

41.6

Associated Gene:

Gene:

EEA1

Ensembl Gene ID:

ENSAPLG00000014455

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015124

46872188 - 46976010

103823

ENSAPLT00000042770

46872188 - 46976010

103823

ENSAPLT00000023696

46917868 - 46976010

58143