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Intron Name: Anas_platyrhynchos_platyrhynchos_1_46958896_46959503_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

46958896 - 46959503

Intron Length:

608

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTATGCATA

5'SS Class:

weak_major

3'SS Sequence:

TCTGTATTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TTTTCTTTATTT

Flanking Amino Acid:

LSKQLEAEREVTSSAKLDLQ

Intron Amino Acid Position:

780

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.5

0.3

1.2

63.6

42.3

Major BPS

83.9

0.84

73.9

41.3

Major PPT

0.74

0.8

77.1

36.1

Minor 5ss

53.7

0.13

2.4

66.5

44.6

Minor BPS

76.2

0.9

1.4

91.47

32.2

Associated Gene:

Gene:

EEA1

Ensembl Gene ID:

ENSAPLG00000014455

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042770

46872188 - 46976010

103823

ENSAPLT00000023696

46917868 - 46976010

58143

ENSAPLT00000015124

46872188 - 46976010

103823