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Intron Name: Anas_platyrhynchos_platyrhynchos_1_46974487_46974787_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

46974487 - 46974787

Intron Length:

301

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATCATTT

5'SS Class:

weak_major

3'SS Sequence:

TTAAATTAAATAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTTTTTTAAAT

Flanking Amino Acid:

ELGRENQSLQIKHTQALNRK

Intron Amino Acid Position:

1339

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.2

74.2

37.1

Major BPS

90.4

0.7

90.2

19.3

Major PPT

59.9

0.22

1.1

55.9

43.2

Minor 5ss

69.3

0.65

2.3

82.5

37.1

Minor BPS

79.5

1.2

92.62

Associated Gene:

Gene:

EEA1

Ensembl Gene ID:

ENSAPLG00000014455

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042770

46872188 - 46976010

103823

ENSAPLT00000023696

46917868 - 46976010

58143

ENSAPLT00000015124

46872188 - 46976010

103823