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Intron Name: Anas_platyrhynchos_platyrhynchos_1_46974887_46975887_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46974887 - 46975887

Intron Length:

1001

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAGGTTTG

5'SS Class:

major

3'SS Sequence:

TTTTCTTTCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTGAT

U12 Branch Point Sequence:

TTTTCTTTCACA

Flanking Amino Acid:

GKGFSVTVRRHHCRQCGNIF

Intron Amino Acid Position:

1372

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

1.1

69.7

43.7

Major BPS

79.8

0.74

0.9

69.4

37.7

Major PPT

91.2

0.93

0.6

87.3

23.1

Minor 5ss

-0.9

3.1

47.2

Minor BPS

75.9

0.81

1.6

86.93

31.8

Associated Gene:

Gene:

EEA1

Ensembl Gene ID:

ENSAPLG00000014455

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042770

46872188 - 46976010

103823

ENSAPLT00000023696

46917868 - 46976010

58143

ENSAPLT00000015124

46872188 - 46976010

103823