Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_46985656_46988853_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46985656 - 46988853

Intron Length:

3198

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTGTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACAGAT

U12 Branch Point Sequence:

TTTCTTGTTACA

Flanking Amino Acid:

LLQTQTEIAKKAWMSQIEMA

Intron Amino Acid Position:

345

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.8

1.15

0.6

96.1

12.1

Major BPS

66.3

0.41

37.5

Major PPT

88.4

0.86

0.8

83.5

31.6

Minor 5ss

37.4

-1.4

2.8

50.6

45.9

Minor BPS

47.3

-0.2

2.2

67.8

38.6

Associated Gene:

Gene:

PLEKHG7

Ensembl Gene ID:

ENSAPLG00000014424

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041333

46985548 - 47005512

19965

ENSAPLT00000015022

46985548 - 47007412

21865