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Intron Name: Anas_platyrhynchos_platyrhynchos_1_47067257_47072710_R

Intron Information:

Intron Rank:

152251

Intron Class:

major

Intron Phase:

Intron Coordinates:

47067257 - 47072710

Intron Length:

5454

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGTT

5'SS Class:

strong_major

3'SS Sequence:

CTCATCTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

AATTTCTGACCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

85.2

32.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

81.2

0.7

0.8

72.5

37.5

Minor 5ss

37.2

-1.4

3.6

57.3

47.4

Minor BPS

58.1

0.33

1.7

76.27

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029484

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046703

47066522 - 47073646

7125