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Intron Name: Anas_platyrhynchos_platyrhynchos_1_47605272_47605490_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47605272 - 47605490

Intron Length:

219

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTATTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

ACATCTTTTATT

Flanking Amino Acid:

FNGLNQVIVLELGTNPLKSS

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.6

0.96

0.8

77.8

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

79.9

0.67

77.1

Minor 5ss

30.7

-2.2

3.3

39.5

45.9

Minor BPS

58.7

0.36

1.6

70.49

41.3

Associated Gene:

Gene:

DCN

Ensembl Gene ID:

ENSAPLG00000013984

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038223

47581030 - 47618330

37301

ENSAPLT00000014597

47576720 - 47612758

36039