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Intron Name: Anas_platyrhynchos_platyrhynchos_1_47637773_47640871_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

47637773 - 47640871

Intron Length:

3099

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

CTTCACTATACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCCCCCTTCACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.4

1.14

0.6

94.3

17.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

75.5

0.57

0.9

35.8

Minor 5ss

38.6

-1.3

3.4

57.8

46.8

Minor BPS

63.8

0.51

1.8

77.05

45.4

Associated Gene:

Gene:

LUM

Ensembl Gene ID:

ENSAPLG00000013979

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035776

47637296 - 47647275

9980

ENSAPLT00000014557

47637296 - 47647132

9837