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Intron Name: Anas_platyrhynchos_platyrhynchos_1_47660552_47661764_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

47660552 - 47661764

Intron Length:

1213

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATTAC

5'SS Class:

strong_major

3'SS Sequence:

CTCCCCTTCTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

ATTGTGTTAAAA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.88

0.9

80.8

Major BPS

77.9

0.69

0.8

75.9

Major PPT

66.7

0.38

70.4

27.8

Minor 5ss

39.8

-1.1

2.9

45.2

Minor BPS

49.1

-0

2.2

66.25

40.3

Associated Gene:

Gene:

KERA

Ensembl Gene ID:

ENSAPLG00000013949

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022717

47660180 - 47667795

7616

ENSAPLT00000014525

47660225 - 47666848

6624