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Intron Name: Anas_platyrhynchos_platyrhynchos_1_48116729_48122071_R

Intron Information:

Intron Rank:

148377

Intron Class:

major

Intron Phase:

Intron Coordinates:

48116729 - 48122071

Intron Length:

5343

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TATCTACTCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TATTGTTTATCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.1

0.92

0.8

81.4

30.6

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

76.2

0.59

0.9

69.5

35.4

Minor 5ss

37.4

-1.4

3.3

49.4

41.4

Minor BPS

59.4

0.37

80.75

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027207

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042780

48116503 - 48188187

71685