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Intron Name: Anas_platyrhynchos_platyrhynchos_1_48120993_48126147_F

Intron Information:

Intron Rank:

138216

Intron Class:

major

Intron Phase:

Intron Coordinates:

48120993 - 48126147

Intron Length:

5155

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTCAGTAAC

5'SS Class:

major

3'SS Sequence:

GCTCATTTCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAGTAT

U12 Branch Point Sequence:

TTTTCCAGCATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.6

0.3

1.3

40.1

Major BPS

59.8

0.24

1.5

60.1

46.3

Major PPT

74.4

0.55

0.9

67.6

37.5

Minor 5ss

32.7

-2

2.6

34.2

34.6

Minor BPS

49.6

-0

2.2

73.3

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024343

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022456

48120787 - 48127400

6614