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Intron Name: Anas_platyrhynchos_platyrhynchos_1_48126263_48126508_F

Intron Information:

Intron Rank:

138217

Intron Class:

major

Intron Phase:

Intron Coordinates:

48126263 - 48126508

Intron Length:

246

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAACTCT

5'SS Class:

major

3'SS Sequence:

TCCTTTCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTTCATATTA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

70.8

35.7

Major BPS

100

1.24

0.5

100

Major PPT

87.6

0.85

0.7

80.2

31.8

Minor 5ss

40.4

-1.1

3.1

56.7

47.6

Minor BPS

58.4

0.26

1.8

75.69

35.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024343

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040734

48120787 - 48127400

6614

ENSAPLT00000022456

48120787 - 48127400

6614