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Intron Name: Anas_platyrhynchos_platyrhynchos_1_48222543_48227344_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48222543 - 48227344

Intron Length:

4802

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTCAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTATTAAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTCTTATTAAAT

Flanking Amino Acid:

CTKLKTSPNEGLSGNPADIE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.1

1.06

0.7

83.2

30.8

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

69.4

0.44

66.6

38.3

Minor 5ss

33.5

-1.9

2.9

40.7

45.5

Minor BPS

64.7

0.54

1.7

82.05

39.1

Associated Gene:

Gene:

ATP2B1

Ensembl Gene ID:

ENSAPLG00000009887

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042280

48222338 - 48254451

32114

ENSAPLT00000010375

48222338 - 48254451

32114