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Intron Name: Anas_platyrhynchos_platyrhynchos_1_48228663_48228743_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48228663 - 48228743

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAACATA

5'SS Class:

major

3'SS Sequence:

TCATCTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATCAT

U12 Branch Point Sequence:

ATGATTTGAAGT

Flanking Amino Acid:

IVGDIAQVKYGDLLPADGIL

Intron Amino Acid Position:

220

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.56

1.1

71.7

39.9

Major BPS

80.4

0.76

80.3

31.8

Major PPT

0.7

0.8

76.9

31.4

Minor 5ss

42.8

-0.8

57.9

46.5

Minor BPS

47.4

-0.1

1.7

63.15

41.3

Associated Gene:

Gene:

ATP2B1

Ensembl Gene ID:

ENSAPLG00000009887

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042280

48222338 - 48254451

32114

ENSAPLT00000010375

48222338 - 48254451

32114