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Intron Name: Anas_platyrhynchos_platyrhynchos_1_48228870_48229229_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48228870 - 48229229

Intron Length:

360

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGTAGC

5'SS Class:

strong_major

3'SS Sequence:

TGCCTTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAA

U12 Branch Point Sequence:

TTAAGTTTCAGT

Flanking Amino Acid:

SLDRDPMLLSGTHVMEGSGR

Intron Amino Acid Position:

262

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

36.6

Major BPS

72.1

0.55

1.1

63.7

43.9

Major PPT

81.3

0.7

0.8

72.8

37.5

Minor 5ss

36.7

-1.5

2.6

45.3

42.8

Minor BPS

43.2

-0.4

2.3

64.8

45.8

Associated Gene:

Gene:

ATP2B1

Ensembl Gene ID:

ENSAPLG00000009887

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042280

48222338 - 48254451

32114

ENSAPLT00000010375

48222338 - 48254451

32114