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Intron Name: Anas_platyrhynchos_platyrhynchos_1_48229374_48232669_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48229374 - 48232669

Intron Length:

3296

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAGGCATA

5'SS Class:

major

3'SS Sequence:

TTCTAACTTCAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TTGCTTCTAACT

Flanking Amino Acid:

EKEKEKKDKKTKAQDGAAME

Intron Amino Acid Position:

306

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.1

71.7

40.1

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

68.2

0.41

1.1

64.9

40.4

Minor 5ss

43.3

-0.7

3.2

56.9

42.1

Minor BPS

58.9

0.36

1.7

77.52

Associated Gene:

Gene:

ATP2B1

Ensembl Gene ID:

ENSAPLG00000009887

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042280

48222338 - 48254451

32114