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Intron Name: Anas_platyrhynchos_platyrhynchos_1_48234222_48235400_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48234222 - 48235400

Intron Length:

1179

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TTTATTTCTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

GATAACTGAACT

Flanking Amino Acid:

VTISLAYSVKKMMKDNNLVR

Intron Amino Acid Position:

436

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.8

1.06

0.7

81.5

32.7

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

85.4

0.8

0.7

81.7

30.1

Minor 5ss

32.1

-2

3.1

40.8

45.4

Minor BPS

56.6

0.29

1.7

73.67

41.8

Associated Gene:

Gene:

ATP2B1

Ensembl Gene ID:

ENSAPLG00000009887

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042280

48222338 - 48254451

32114

ENSAPLT00000010375

48222338 - 48254451

32114