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Intron Name: Anas_platyrhynchos_platyrhynchos_1_48235644_48237627_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48235644 - 48237627

Intron Length:

1984

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

GTTCTTCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTCAT

U12 Branch Point Sequence:

ACCTCCTCATCA

Flanking Amino Acid:

VNCAYTSKILPPEKEGGLPR

Intron Amino Acid Position:

517

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

79.8

35.3

Major BPS

82.3

0.8

0.9

81.8

30.8

Major PPT

86.3

0.82

0.8

80.9

31.1

Minor 5ss

35.2

-1.7

2.7

39.5

40.9

Minor BPS

51.9

0.06

1.9

61.77

44.4

Associated Gene:

Gene:

ATP2B1

Ensembl Gene ID:

ENSAPLG00000009887

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042280

48222338 - 48254451

32114

ENSAPLT00000010375

48222338 - 48254451

32114