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Intron Name: Anas_platyrhynchos_platyrhynchos_1_48278717_48278811_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48278717 - 48278811

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGAAG

5'SS Class:

strong_major

3'SS Sequence:

CCTTGTCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGATAAC

U12 Branch Point Sequence:

GGCGGCTGACGG

Flanking Amino Acid:

GPAAPMASALEDPVLLRPLR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

71.3

40.1

Major BPS

-0.1

1.3

49.7

42.2

Major PPT

74.2

0.54

0.8

65.2

36.3

Minor 5ss

31.8

-2.1

3.1

36.5

41.9

Minor BPS

32.7

-1.4

2.1

28.89

41.5

Associated Gene:

Gene:

POC1B

Ensembl Gene ID:

ENSAPLG00000011048

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011505

48278621 - 48326682

48062