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Intron Name: Anas_platyrhynchos_platyrhynchos_1_48287182_48287979_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48287182 - 48287979

Intron Length:

798

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

TTAAATATTACT

Flanking Amino Acid:

DRTVRLWIPCIHGESSVLKG

Intron Amino Acid Position:

118

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

79.6

28.3

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

96.1

1.04

0.5

95.6

14.9

Minor 5ss

33.2

-1.9

3.4

44.6

43.6

Minor BPS

-0.3

67.82

42.2

Associated Gene:

Gene:

POC1B

Ensembl Gene ID:

ENSAPLG00000011048

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020842

48282975 - 48326682

43708

ENSAPLT00000011505

48278621 - 48326682

48062