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Intron Name: Anas_platyrhynchos_platyrhynchos_1_48290473_48290852_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48290473 - 48290852

Intron Length:

380

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAAGCA

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTAAATTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TCTTCTGTAAAT

Flanking Amino Acid:

RMNKLLQHYRVHRAGVNCVS

Intron Amino Acid Position:

253

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

0.9

71.1

32.5

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

64.4

0.32

64.5

40.5

Minor 5ss

30.1

-2.3

3.3

39.5

45.9

Minor BPS

59.2

0.37

2.1

80.63

41.5

Associated Gene:

Gene:

POC1B

Ensembl Gene ID:

ENSAPLG00000011048

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020842

48282975 - 48326682

43708

ENSAPLT00000011505

48278621 - 48326682

48062