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Intron Name: Anas_platyrhynchos_platyrhynchos_1_48301664_48325506_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48301664 - 48325506

Intron Length:

23843

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTTGC

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTATTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCAAAT

U12 Branch Point Sequence:

GAATCTTCAAAT

Flanking Amino Acid:

ITSSLAFGTLDDVSHEDLQY

Intron Amino Acid Position:

401

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

74.9

36.2

Major BPS

77.3

0.68

81.5

Major PPT

78.6

0.64

0.8

73.3

Minor 5ss

40.7

-1

2.8

49.7

41.9

Minor BPS

55.1

0.24

1.6

68.99

41.1

Associated Gene:

Gene:

POC1B

Ensembl Gene ID:

ENSAPLG00000011048

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020842

48282975 - 48326682

43708

ENSAPLT00000011505

48278621 - 48326682

48062