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Intron Name: Anas_platyrhynchos_platyrhynchos_1_48325690_48326577_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48325690 - 48326577

Intron Length:

888

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTAAGTATG

5'SS Class:

major

3'SS Sequence:

CCTCTTCATGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

TATTAAAAAAAA

Flanking Amino Acid:

IVEQLDVLTLTISILEQRLT

Intron Amino Acid Position:

462

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

77.3

37.6

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

78.1

0.63

0.8

30.7

Minor 5ss

41.2

-1

2.8

53.2

38.8

Minor BPS

40.7

-0.7

2.2

57.65

40.6

Associated Gene:

Gene:

POC1B

Ensembl Gene ID:

ENSAPLG00000011048

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020842

48282975 - 48326682

43708

ENSAPLT00000011505

48278621 - 48326682

48062