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Intron Name: Anas_platyrhynchos_platyrhynchos_1_48403532_48404847_F

Intron Information:

Intron Rank:

146420

Intron Class:

major

Intron Phase:

Intron Coordinates:

48403532 - 48404847

Intron Length:

1316

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGGTTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTCCTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTGAA

U12 Branch Point Sequence:

AAAATCTGAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

0.9

77.3

33.4

Major BPS

73.3

0.58

0.9

63.4

35.6

Major PPT

76.9

0.61

0.9

82.9

26.1

Minor 5ss

37.4

-1.4

3.5

52.2

Minor BPS

49.5

0.05

1.5

63.9

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028896

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020765

48403480 - 48428358

24879