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Intron Name: Anas_platyrhynchos_platyrhynchos_1_48756946_48764306_F

Intron Information:

Intron Rank:

142238

Intron Class:

major

Intron Phase:

Intron Coordinates:

48756946 - 48764306

Intron Length:

7361

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ATG|GCAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TTCATTATAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.87

88.3

26.2

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

96.1

1.04

0.5

95.6

14.9

Minor 5ss

28.2

-2.5

3.8

40.7

39.2

Minor BPS

54.5

0.22

1.6

72.63

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026594

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046591

48756690 - 48768851

12162